PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008227976.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 365aa    MW: 42070.7 Da    PI: 4.4792
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008227976.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.11.2e-17101363128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatg 87 
                      GfrF+Ptd+e++  +L k v +k+      + ++vi+++++  +k eP+++ + + +   +++++yf s+ ++   +g r +r+t +g+W++t 
  XP_008227976.1  10 LGFRFRPTDQEIIGSFLYKMVVEKRpltsmPQYNKVIHKCNLfgNKREPSEIWRDYGGdqlTDQDLYFVSELQR---NGLRIQRKTGRGTWSETE 101
                     6*******************9999889886556678****9833577*****7533332225567788887766...799**************9 PP

             NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + ++v +     +g k+ + + +g+a++  ++ W+++ey+l
  XP_008227976.1 102 TYQNVDV-----IGRKRKFRYENGNASE-DHAVWLLDEYSL 136
                     9888866.....**********999998.89********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100519.298162IPR003441NAC domain
SuperFamilySSF1019411.57E-189162IPR003441NAC domain
PfamPF023656.9E-1311136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MANSGVTQLL GFRFRPTDQE IIGSFLYKMV VEKRPLTSMP QYNKVIHKCN LFGNKREPSE  60
IWRDYGGDQL TDQDLYFVSE LQRNGLRIQR KTGRGTWSET ETYQNVDVIG RKRKFRYENG  120
NASEDHAVWL LDEYSLFKKA CKNGTSSNCY DFDVVICRLR RKGNMDKSGK KRKCSCQDQS  180
NKKMKRDQST KEMKTEISVG PQIMNDERNQ LMINESTTYD QEYLIDTNYK SFNIDQLFAG  240
LDGEPPLLHS QQLPQIAESQ EEPCVDQIDG PAEAATSNLS NFEYNRDELA GLIGQYNMNA  300
DDYEDQNLFI DVDELLAADA EPLSTFAELD DVHNVVSQPL DQNGYWSNSF MDQTYNSFME  360
EIMAD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1159184RRKGNMDKSGKKRKCSCQDQSNKKMK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008227976.10.0PREDICTED: protein FEZ-like
TrEMBLM5W3Q10.0M5W3Q1_PRUPE; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1785336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.23e-13NAC domain containing protein 50